Dec 16, 2008

Ask me anything.

Ask me anything, and I can help you. Especially if your questions are easy. :) I have worked in the Molecular Graphics Lab at Scripps Research for nearly 5 years using PMV for most that time. If there is something you want to do, and it seems like it should be easy, it probably requires some little trick to get working and I will tell you how.

email me, Jon Huntoon,


Anonymous said...

my name is Thiago. I graduated in Biomedicine at Universidade Federal do Triângulo Mineiro, Brazil. Now I'm taking my master degree in Physiological Science. I'm working with kallikrein inhibitors. So, I need a program to dock this protein with their inhibitor. In our lab we have Macromodel software, but the package Glide needs to be renwed. I saw that AutoDock is able to do the same job as Macromodel. So I downloaded the AutoDock program (also Cyrwin too, as my pc uses Windows), and MGL Tools. The problem is that when I open the PMV and ADT, both dont't work and a error message apears, it accuses a "math domain error". Strangely, this doesn't happend with Vision.
I don't know if this kind of problem you can help me, but I wasn't able to use Bugzilla, and I need to learn how to do docking as soon as possible. Sorry for my grammar and spelling mistakes.
Thank you so much for you atention.

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